Computational Biology Research Center[CBRC]

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Staff List

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Ａ
		Key word	Team/Responsibility	e-mail
		Gene regulatory network, Graphical models	Sequence Analysis
Sachiyo Aburatani			Research Scientist
		metabolomics, metabolism, database, network	-
Masanori Arita			Invited Senior Research Scientist
		Genome Information Analysis, Comparative Genomics, Functional RNA,Non-coding RNA, Stochastic Model, Sequence Analysis, Secondary Structure of RNA	-
Kiyoshi Asai			Director

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Ｃ
		Key word	Team/Responsibility	e-mail
		FPGA-accelerated sequence alignment, primer design, promoter analysis, gene expression data analysis	Cell Function Design
Hirokazu Chiba			Technical Staff
		annotation, enzyme, database	Cell Function Design
Yuko Chujo			Technical Staff

Ｆ
		Key word	Team/Responsibility	e-mail
		genome evolution, motifs, genome function,alignment	Sequence Analysis
Martin Frith			Research Scientist
		cell state-space analysis, large-scale gene expression data mining, microarray standardization, speed-up of bio-calculation by accelerator	Cell Function Design
Wataru Fujibuchi			Leader
		Pathway informatics, Pathway database, Ontology, Semantic Web, Knowledge Representation, Logic, BioPAX, OBO (Open Biomedical Ontologies)	Biological Network
Kenichiro Fukuda			Research Scientist
		Molecular Simulation, Saccharides, GRID, HPC, Protein Interaction, Fragmentation Mechanism, LASER, Photo-induced　reaction	Molecular Function
Kazuhiko Fukui			Leader

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Ｇ
		Key word	Team/Responsibility	e-mail
		sequence analysis, sequence alignment, gene finding, comparative genomics, gene evolution, cytochrome P450	-
Osamu Gotoh			Invited Senior Research Scientist
		Membrane and Globular Proteins: analysis, prediction, folding, stability, interactions, database and algorithms	Molecular Function
Michael　Gromiha			Senior Research Scientist

Ｈ
		Key word	Team/Responsibility	e-mail
		-	Cell Function Design
Akiko Hatano			Technical Staff
		protein modeling, in silico screening, drug design, molecular simulation, G protein-coupled receptors	Molecular Modeling ＆ Drug Design
Takatsugu Hirokawa			Leader
		protein motion, flexibility, disordered region, internal motion, external motion, amino acid sequence, protein solubility	Molecular Function
Shuichi Hirose			AIST Research Staff
		Statistical inference for association and causality, Algebraic computation	Biological Network
Katsuhisa Horimoto			Leader
		Genome Sequence Analysis,Protein localization prediction, Motif Discovery, Gene Expression Analysis	Sequence Analysis
Paul Horton			Leader

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Ｉ
		Key word	Team/Responsibility	e-mail
		Subcellualar localization of protein, Sorting signal Analysis, Mitochondrial protein	Sequence Analysis
Kenichiro Imai			AIST Research Staff

Ｋ
		Key word	Team/Responsibility	e-mail
		molecular dynamics, replica exchange method, protein folding, amyloid and aggregation	Molecular Modeling ＆ Drug Design
Tomoshi Kameda			Research Scientist

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Ｍ
		Key word	Team/Responsibility	e-mail
		database,microarray,noncoding,microRNA,giga sequencer	RNA Informatics
Toutai Mituyama			Leader
		Bioinformatics Training Course	-
Kentaro Mizutani			Technical Staff
			Cell Function Design
Harry Amri Moesa			Technical Staff
		time series analysis, network modeling, visualization	Biological Network
Ryoko Morioka			AIST Research Staff
		molecular dynamics protein stability, folding, tertiary structure prediction	Molecular Modeling ＆ Drug Design
Chie Motono			Research Scientist

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Ｎ
		Key word	Team/Responsibility	e-mail
		enzyme, enzyme reaction, protein structure and function	Cell Function Design
Nozomi Nagano			Senior Research Scientist
		Systems biology, Symbolic computation, Gene regulatory networks, Time-series analysis, Numerical optimization	Biological Network
Masahiko Nakatsui			AIST Research Staff
		protein function, protein-protein interaction, drug design, globular and membrane proteins, GPCRs	Molecular Function
Wataru Nemoto			AIST Research Staff
		Protein, Structute, Function, Binding site, Disorder	-
Tamotsu Noguchi			Depity Director

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Ｏ
		Key word	Team/Responsibility	e-mail
		annotation, enzyme, database	Cell Function Design
Fumi Osawa			Technical Staff

Ｐ
		Key word	Team/Responsibility	e-mail
		machine learning, gene regulatory networks prediction, gene expression data analysis, cell differentiation	Cell Function Design
Jean-Francois Kenichi Pessiot			AIST Research Staff

Ｓ
		Key word	Team/Responsibility	e-mail
		Bioinformatics Training Course	Molecular Modeling ＆ Drug Design
Hiroko Sakai			Technical Staff
		structural bioinformatics, molecular dynamics simulation, protein folding, molecular recognition, free-energy landscape	Molecular Function
Daisuke Satoh			AIST Research Staff
		Protein, Protein Structure, Disorder	RNA Informatics
Kana Shimizu			Research Scientist
		annotation, enzyme, database	Cell Function Design
Yixuan Song			Technical Staff
		G-protein-coupled receptors (GPCRs), Rhodopsin, Sequence analysis, Molecular dynamics, QM/MM, Quantum chemistry	Cell Function Design
Minoru Sugihara			Technical Staff
		Protein function prediction, membrane protein, G-protein coupling receptor,Comparative genome analysis	-
Makiko Suwa			Principal Research Scientist

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Ｔ
		Key word	Team/Responsibility	e-mail
		workflow, pipeline, distributed processing, parallel processing	Molecular Function
Toshiyuki Tashiro			Technical Staff
		Bioinformatics Training Course	Molecular Modeling ＆ Drug Design
Tomoko Terada			Technical Staff
		protein engineering, sequence comparison,protein-protein interaction, molecular evolution	-
Hiroyuki Toh			Invited Senior Research Scientist
		protein structure prediction, profile-profile alignment,FORTE,sequence alignment	Sequence Analysis
Kentaro Tomii			Planning Officer
		Systems biology, Time series analysis, Symbolic computation, Numerical optimization, Gene regulatory networks, S-system, Periodicity judgment	Biological Network
Daisuke Tominaga			Research Scientist
		Machine learning, Kernel methods, Protein networks, Structured data	RNA Informatics
Koji Tsuda			Senior Research Scientist

Ｕ
		Key word	Team/Responsibility	e-mail
		electron microscopy, single particle analysis,molecular graphics, scripting language, fiber diffraction, protein interactions	-
Yutaka Ueno			Senior Research Scientist
			Molecular Function
Shogo Ushiyama			Technical Staff

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Ｗ
		Key word	Team/Responsibility	e-mail
		sequence analysis, text compression, graph theory, machine learning	-
Raymond Wan			AIST Research Staff
		marginal distribution of gene expression, alignment statistics, deep sequencing error analysis	Sequence Analysis
Edward Wijaya			AIST Research Staff

Ｙ
		Key word	Team/Responsibility	e-mail
		Protein - DNA/RNA interaction, DNA/RNA folding, molecular dynamics simulation	Molecular Function
Satoshi Yamasaki			AIST Research Staff
		database analysis,statistical analysis, molecular simlation, thermo stability, functional analysis	Molecular Function
Kiyonobu Yokota			AIST Research Staff