Computational Biology Research Center[CBRC]

Katoh K, Standley DM.,:"MAFFT multiple sequence alignment software version 7: improvements in performance and usability.", Mol Biol Evol. 30(4):772-80.(2013). Abstract
Shrestha AM, Frith MC.,:"An approximate Bayesian approach for mapping paired-end DNA reads to a reference genome.", Bioinformatics. 29(8):965-72.(2013). Abstract
Wijaya E, Frith MC, Horton P, Asai K.,:"Finding protein-coding genes through human polymorphisms.", PLoS One. 8(1):e54210.(2013). Abstract
Tsuzuki T, Sakaguchi N, Kudoh T, Takano S, Uehara M, Murayama T, Sakurai T, Hashii M, Higashida H, Weber K, Guse AH, Kameda T, Hirokawa T, Kumaki Y, Potter BV, Fukuda H, Arisawa M, Shuto S.,:"Design and Synthesis of Cyclic ADP-4-Thioribose as a Stable Equivalent of Cyclic ADP-Ribose, a Calcium Ion-Mobilizing Second Messenger.", Angew Chem Int Ed Engl. doi: 10.1002/anie.201302098.(2013). Abstract
Kitazawa S, Kameda T, Yagi-Utsumi M, Sugase K, Baxter NJ, Kato K, Williamson MP, Kitahara R.,:"Solution structure of the Q41N variant of ubiquitin as a model for the alternatively folded N2 state of ubiquitin.", Biochemistry52(11):1874-85. doi: 10.1021/bi301420m.(2013). Abstract

Hitaoka Seiji, Shibata Yuto, Matoba Hiroshi, Kawano Akihiro, Harada Masataka, Rahman Motiur M, Daisuke Tsuji, Hirokawa Takatsugu, Kouji Itou, Tatsusada Yoshida and Hiroshi Chuman,:"Modeling of Human Neuraminidase-1 and Its Validation by LERE-Correlation Analysis", Chem-Bio Informatics Journal, Vol.13, pp.30-40(2013). Abstract

Ueda T, Tominaga D, Araki N, Yoshikawa T.,:"Estimate hidden dynamic profiles of siRNA effect on apoptosis.", BMC Bioinformatics, 14:97. doi: 10.1186/1471-2105-14-97.(2013). Abstract

Tsuyuzaki K, Tominaga D, Kwon Y, Miyazaki S.,:"Two-way AIC: detection of differentially expressed genes from large scale microarray meta-dataset.", BMC Genomics 14 Suppl 2:S9. doi: 10.1186/1471-2164-14-S2-S9.(2013). Abstract

Tamura Y, Harada Y, Nishikawa SI, Yamano K, Kamiya M, Shiota T, Kuroda T, Kuge O, Sesaki H, Imai K, Tomii K, Endo T.:"Tam41 Is a CDP-Diacylglycerol Synthase Required for Cardiolipin Biosynthesis in Mitochondria", Cell Metabolism, in press.(2013). Abstract

Nishino T, Rago F, Hori T, Tomii K, Cheeseman IM, Fukagawa T.:"CENP-T provides a structural platform for outer kinetochore assembly.", The EMBO Journa, 6;32(3), pp.424-36.(2013). Abstract

Kimura M, Kose S, Okumura N, Imai K, Furuta M, Sakiyama N, Tomii K, Horton P, Takao T, Imamoto N.:"Identification of cargo proteins specific for the nucleocytoplasmic transport carrier transportin by combination of an in vitro transport system and stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative proteomics.", Mol Cell Proteomics.,12(1), pp145-57(2013). Abstract

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